September 2015 SPADA Meeting
Background
Comparative genomics: Pathotype model?
Phase($)Original source
Disease
Passage([[)
Group(*)Plasmid type(&)Isolate(+)
I
QpH1
NineMile RSA493
I
Montana tick, 1935 Montana tick 1935 , Montana tick, 1935 Montana tick, 1935
- - - -
307GP/1TC/1EP 90EP/1TC/1EP 4 EP/306GP/3EP 4 EP/306GP/3EP
NineMile RSA439(>) II NineMile RSA514(>) I/II# NineMile RSA285-A(>)I/II# American Q Dyer(>) I Australia QD RSA425 II Dyer RSA 345 II
USA, humanblood, 1938 USA, humanblood, 1938 Australia, humanblood, ~1939 Turkey, humanblood, 1948 Central Africa, humanblood, 1949 Central Africa, humanblood, 1949
Acute Acute Acute Acute
81EP
75EP/1GP
177EP 31EP
Turkey RSA333 African RSA334(>) Giround RSA431(>) ElTayeb RSA342 Panama RSA335
II
I I I I
Acute, Congolese RedFever3HP/4EP Acute, Congolese RedFever2GP/2EP
Egypt, tick, 1967
- -
4GP/2EP
Panama, chiggers, 1961 California, cow'smilk, 1947 California, cow'smilk, 1947 Ohio, cow'smilk,1956 Ohio, cow'smilk,1956 Italo-Greek, 'Grita', ~1945 Italo-Greek, 'Grita', ~1945 Italy, humanblood,1945
4EP 6EP
California 33 RSA329 I California 16 RSA350 II
Persistent Persistent Persistent Persistent
38EP 4EP 42EP ?/2EP 36EP 2EP 5EP
Ohio 314 RSA270 Ohio 314 RSA338
I
II II II II
II
QpH1
M44 RSA459 M44 Q141(>)
Acute Acute Acute
?/1GP/2EP
Henzerling RSA331 Idahogoat Q195
III
QpH1
I I I I I I I I I I I I I I I I
Idahogoat,1981
Abortion Abortion
Idahogoat
Idahogoat placenta, 1975
Koka
Ethiopia tick 1963 , ,
-
1GP/6EP GP/2EP 1GP/1EP 1GP/4EP HV/2EP HV/2EP HV/3EP HV/2EP HV/2EP HV/2EP BX/2EP HV/2EP
IV
QpRS
MSU GoatQ177 Canada GoatQ218 Idaho Sheep 80-1
Montana,goat cotyledon,1980
Abortion
Ontario, Canada,goat spleen,1981 Abortion
Idaho sheep liver,1980
Abortion
KQ154 PQ173 FQ228 LQ216 GQ212 SQ217 KoQ229 HWSU101
Oregon, human heart valve,1976
Endocarditis
California, humanheart valve,1979 Endocarditis Washington, humanheart valve, 1982Endocarditis California, humanheart valve,1986 Endocarditis NovaScotia, humanheart valve,1981Endocarditis NovaScotia, humanheart valve,1981Endocarditis Montana, human liverbiopsy, 1981 Hepatitis NovaScotia, humanheart valve,1982Endocarditis
V
NP
VI
QpDG
Dugway 7E22-57 Dugway 7E9-12
Utah, rodents, 1958 Utah, rodents, 1958
- -
3EP 3EP
Samuel et al. 1985
C. burnetii phylogenetic organization
SNP and VNTR based trees for 25 worldwide isolates of Coxiella burnetii. Geographical distribution shown below. Pearson, Keim et al. ASM2005
Glazunova et al. EID 2005
Made with FlippingBook