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107
Protein Structure and Conformation III
(Boards B1 - B21)
1857-Pos
Board B1
PHOTO-ISOMERIZATION OF PROLYCOPENE IN CHLOROPLAST OCCURS
THROUGH THE TRIPLET STATE: IMPLICATIONS ON CAROTENOID BIOSYN-
THESIS.
Vijaya Lakshmi Kanchustambham
1858-Pos
Board B2
FUNCTION OF TYR185 IN STABILIZING THE ISOMERIZATION EQUILIB-
RIUM OF THE RETINAL CHROMOPHORE IN THE BACTERIORHODOPSIN
GROUND STATE. Xiaoyan Ding, Bo Peng, Yujiao Gao, Haolin Cui, Dinu Iuga,
Peter Judge, Anthony Watts,
Xin Zhao
1859-Pos
Board B3
TRYTOPHAN MUTANTS PROBE THE STRUCTURAL AND FUNCTIONAL
STATUS OF A COPPER BINDING, CYTOCHROME C OXIDASE ASSEMBLY
PROTEIN FROM BACILLUS SUBTILIS (I.E., BSSCO).
Bruce C. Hill
, Shina
Hussain, Diann Andrews
1860-Pos
Board B4
PRESSURE-INDUCED SPECTRAL SHIFTS IN GFP MUTANTS EXPLAINED BY
MOLECULAR DYNAMICS SIMULATIONS. Emanuela Jacchetti, Edi
Gabellieri, Patrizia Cioni, Ranieri Bizzarri,
Riccardo Nifosi
1861-Pos
Board B5
ON THE ORIGIN OF THE EXTENDED STOKE’S SHIFTS IN FLUORESCENT
PROTEINS.
Prem Chapagain
, Chola Regmi, Bernard Gerstman
1862-Pos
Board B6
EDUCATION TRAVEL AWARDEE
INTERDOMAIN INTERACTIONS AND THE MECHANISM OF STRUCTURAL
TRANSFORMATION IN RFAH.
Jeevan B. Gc
, Bernard S. Gerstman, Prem P.
Chapagain
1863-Pos
Board B7
TOOLKIT FOR MULTI-CONFORMATION BIOMOLECULAR STRUCTURE
DETERMINATION BY HIGH-PRECISION FRET AND MOLECULAR SIMULA-
TIONS.
Mykola Dimura
, Stanislav Kalinin, Thomas Peulen, Holger Gohlke,
Claus A. M. Seidel
1864-Pos
Board B8
UNDERSTANDING SECONDARY STRUCTURE HYDROGEN BONDS OF PEP-
TIDES USING STEERED MOLECULAR DYNAMICS SIMULATIONS (SMD).
Ferdiemar C. Guinto
, C. Michael McCallum
1865-Pos
Board B9
WHY DOES NATURE TIE-UP PROTEINS? STRUCTURAL INSIGHTS FROM SO-
LUTION STUDIES OF A KNOTTED METHYLTRANSFERASE.
David J. Burban
,
Patricia A. Jennings
1866-Pos
Board B10
BUILDING GRAPHS TO DESCRIBE DYNAMICS, KINETICS AND ENERGETICS
IN THE D-ALA:D-LAC LIGASE VANA. Guillaume Bouvier, Nathalie
Duclert-Savatier, Michael Nilges,
Thérèse E. Malliavin
1867-Pos
Board B11
COMPLEX LASSO: NEW ENTANGLED MOTIFS IN PROTEINS.
Joanna I.
Sulkowska
1868-Pos
Board B12
COARSE MASTER EQUATION-BASED ANALYSIS OF N-METHYLATION AND
TEMPERATURE EFFECTS ON THE DYNAMICS OF CYCLIC PEPTIDES.
Aoife Crowe, Goar Sánchez-Sanz, Bartlomiej Tywoniuk, Denis C. Shields,
Nicolae-Viorel Buchete
1869-Pos
Board B13
INSIGHT INTO THE STRUCTURE OF LUNG SURFACTANT PROTEIN B
(SP-B).
Tadiwos G. Asrat
, Dr.Valeri Booth
1870-Pos
Board B14
STRUCTURAL ANALYSIS OF LIPOCALIN-TYPE PROSTAGLANDIN D SYN-
THASE COMPLEXED WITH PROSTAGLANDIN J
2
.
Shigeru Shimamoto
, Yuta
Nakahata, Yusuke Nakagawa, Yutaro Fukuda, Kosuke Aritake, Yoshihiro
Urade, Yuji Hidaka
1871-Pos
Board B15
THE BIO3D PROJECT: INTERACTIVE TOOLS FOR STRUCTURAL BIOINFOR-
MATICS.
Lars Skjærven
, Shashank Jariwala, Xin-Qiu Yao, Julien Idé, Barry
J. Grant
1872-Pos
Board B16
PROBING LOCAL ENVIRONMENTS OF AN OXYGEN-BINDING HEME-
PROTEIN USING A SPECTROSCOPICALLY ACTIVE UNNATURAL AMINO
ACID.
Daniyal Tariq
1873-Pos
Board B17
STRUCTURAL INSIGHT INTO SPLIT GREEN FLUORESCENT PROTEIN.
Alan Deng
, Steven G. Boxer
1874-Pos
Board B18
STRUCTURAL AND DYNAMICAL ASPECTS OF ELECTROSTATIC INTER-
ACTIONS BY APPLYING ASPHERICAL ATOMMODEL IN HIV-1 PROTE-
ASE.
Prashant Kumar
, Paulina Maria Dominiak
1875-Pos
Board B19
PROBING THE ELASTIC PROPERTIES OF ALPHA HELICES VIA BUCKLING
SIMULATIONS.
Nicholas Jin
, Markus Deserno
1876-Pos
Board B20
HETEROTRIMERIC G-PROTEIN ALPHA (α) SUBUNIT FROM A. THALIANA
FORMS TRIMERIC STRUCTURES IN SOLUTION.
Ersoy Cholak
, Ines
Karmous, Bihter Avşar, Zehra Sayers
1877-Pos
Board B21
PROTONATION AND DEPROTONATION REACTION OF ASPARTIC ACID SIDE
CHAIN MODULATED BY THE SURROUNDING DIELECTRIC MEDIUM - AB
INITIO QUANTUM CHEMICAL STUDIES ON ASPARTIC ACID IN SIXTEEN
DIFFERENT SOLVENTS AND TWO PROTEIN STRUCTURES.
Akshay
Bhatnagar
, Sruthi Varanasi, Dhruv Pramod Ghiya, Chaitanya Gali Sai
Ganesh, Debashree Bandyopadhyay
Protein Dynamics and Allostery III
(Boards B22 - B39)
1878-Pos
Board B22
OXIDATION EFFECTS ON THE VON WILLEBRAND FACTOR A2 DOMAIN
INVESTIGATED BY MOLECULAR DYNAMICS SIMULATIONS.
Gianluca
Interlandi
1879-Pos
Board B23
INSIGHT INTO A RAPID HEME TRANSFER REACTION BETWEEN NEAR
TRANSPORTER DOMAINS OF STAPHYLOCOCCUS AUREUS: A THEORETI-
CAL STUDY USING QM/MM AND MD SIMULATIONS.
Yoshitaka Moriwaki
,
Tohru Terada, Kouhei Tsumoto, Kentaro Shimizu
1880-Pos
Board B24
THE COUPLING OF ATP HYDROLYSIS TO RNA TRANSLOCATION IN DENGUE
VIRUS NS3 HELICASE: INSIGHTS FROMMOLECULAR DYNAMICS.
Martin
McCullagh
, Russell Davidson
1881-Pos
Board B25
ALLOSTERIC NETWORKS IN THE NUCLEOSOME CORE PARTICLE.
Samuel
Bowerman
, Jeff Wereszczynski
1882-Pos
Board B26
INVESTIGATING DYNAMICS OF HLA MOLECULES BY ENERGY DISSIPA-
TION. Elif Naz Bingol, Onur Sercinoglu,
Pemra Ozbek