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98

Biophysical Society 59

th

Annual Meeting, Baltimore, Maryland

1574-P

os

B

oard

B525

DNA FLUORESCENCE PARAMETERS AND METHYLATION

LEVELS OF GUT COMMENSAL ESCHERICHIA COLI FROM

CROHN’S DISEASE PATIENTS.

Astghik Pepoyan

, Marine Balayan,

Anahit Manvelyan, Seda Marutyan, Lia Minasbekyan, Karlen Hovnanyan,

Vardan Tsaturyan

1575-P

os

B

oard

B526

ISOLATION, FRAGMENTATION AND THE DETECTION OF

LISTERIA DNA FROM GROUND BEEF.

Tonya M. Santaus

1576-P

os

B

oard

B527

RAPID MICROBIAL LYSING AND DNA FRAGMENTATION BY

MICROWAVE FOCUSING.

Johan Melendez

, Daniel Kiang, Tonya

Santaus, Chris Geddes

1577-P

os

B

oard

B528

PALMITATE RE-DIRECTS GLUCOSE UTILIZATION IN

TYPE 2 DIABETIC HEARTS, IMPROVING FUNCTION: A

METABOLOMIC-FLUXOMIC STUDY. Sonia Cortassa, Viviane

Caceres, Carlo G. Tocchetti, Brian O’Rourke, Nazareno Paolocci,

Miguel A. Aon

1578-P

os

B

oard

B529

MODELING HOST - BACTERIAL BIOFILM INTERACTIONS IN

LOWER LEG CHRONIC WOUNDS.

M vandeVen

1579-P

os

B

oard

B530

MODEL FOR AGING AND COGNITIVE DECLINE.

Maxwell P. Henderson

Molecular Dynamics II

(Boards B531-B557)

1580-P

os

B

oard

B531

COMPARISON OF ACTIVATION ENERGY AND

PORE DYNAMICS IN LIQUID AND GEL PHASES OF

ELECTROPORATED LIPID BILAYERS USING TEMPERATURE

DEPENDENT MD SIMULATIONS.

Amit K. Majhi

, Subbarao Kanchi,

Venki Venkataraman, Ganapathy Ayappa, Prabal Maiti

1581-P

os

B

oard

B532

THE CARBOXY TERMINUS OF THE LIGAND PEPTIDE

DETERMINES MHC CLASS I COMPLEX STABILITY: A

COMBINED MOLECULAR DYNAMICS AND EXPERIMENTAL

STUDY.

Esam T. Abualrous

1582-P

os

B

oard

B533

MOLECULAR MODELLING IN MRI CONTRAST AGENTS

INTERACTING WITH WATER MOLECULES: HIERARCHICAL

CLUSTERING METHOD FOR MOLECULAR DYNAMICS DATA

ANALYSIS. Luca Guzzardi, Dennis Cazar, Vanessa del Hierro, Fernando

J. Torres,

Miguel A. Mendez

1583-P

os

B

oard

B534

HIS 95 ACTS AS A PH GATE IN AQUAPORIN-4.

Shreyas S. Kaptan

,

Bert L. de Groot

1584-P

os

B

oard

B535

STRUCTURAL AND DYNAMICAL STUDY OF BOVINE

CARBONIC ANHYDRASE II IN THE PRESENCE OF SUBSTRATE:

AN ESSENTIAL DYNAMICS AND MOLECULAR DYNAMICS

SIMULATION STUDY. Elham Morad,

Bahram Goliaei

, Faramarz

Mehrnejad

1585-P

os

B

oard

B536

RESOLVING THE MECHANISMS OF BACTERIAL RESISTANCE

TO MACROLIDE ANTIBIOTICS.

Anna Pavlova

, James C. Gumbart

1586-P

os

B

oard

B537

MOLECULAR MODELING OF SELF-ASSEMBLY OF

ANTICANCER DRUG AMPHIPHILES.

Myungshim Kang

, Honggang

Cui, Sharon M. Loverde

1587-P

os

B

oard

B538

SIMULATING THE SERPIN LATENCY TRANSITION AT ATOMIC

RESOLUTION.

Patrick Wintrode

, Pietro Faccioli, Silvio a Beccara,

Anne Gershenson, Giorgia Cazzolli, Fang Wang

1588-P

os

B

oard

B539

ESTIMATING THE DIFFUSION CONSTANT FROM NOISY

TRAJECTORIES.

Peter K. Relich

, Keith A. Lidke, Mark J. Olah

1589-P

os

B

oard

B540

MOLECULAR INSIGHTS INTO THE SIGNALING MECHANISM

OF THE HISTIDINE KINASE CHEA WITHIN AN INTACT

BACTERIAL CHEMOSENSORY ARRAY.

C. Keith Cassidy

, Benjamin

Himes, Frances Joan D. Alvarez, Juan R. Perilla, Jun Ma, Gongpu Zhao,

Peijun Zhang, Klaus Schulten

1590-P

os

B

oard

B541

CALCULATION OF CHOLESTEROL BINDING AFFINITY FOR

PENTAMERIC LIGAND-GATED ION CHANNELS.

Reza Salari

,

Jerome Henin, Grace Brannigan

1591-P

os

B

oard

B542

CHARACTERIZATION OF TRANSIENTLY STABLE

STRUCTURAL MOTIFS IN INTRINSICALLY DISORDERED

PROTEINS USING FREE ENERGY SIMULATIONS.

Rainer Bomblies

, Manuel Luitz, Martin Zacharias

1592-P

os

B

oard

B543

COMPUTATIONAL STUDY OF UBIQUITIN RECRUITMENT

AND TRANSPORT OF THE 26S PROTEASOME.

Till Rudack

, Yi

Zhang, Lela Vucovic, Wei Han, Klaus Schulten

1593-P

os

B

oard

B544

ATOMISTIC MECHANISM OF PEPTIDE UNFOLDING AND

TRANSLOCATION BY AAA+ UNFOLDING CHAPERONES

CLPY.

Huan Wang

, George Stan

1594-P

os

B

oard

B545

MECHANISM OF INHIBITION OF GLYCOSIDE

HYDROLASES INVESTIGATED BY MOLECULAR DYNAMICS

SIMULATIONS.

Rafael C. Bernardi

, Isaac Cann, Erin Imsand, Douglas

Clark, Klaus Schulten

1595-P

os

B

oard

B546

STRUCTURAL DETERMINANTS OF HYBRID STATE

INTERMEDIATES OF THE BACTERIAL RIBOSOME.

Andrea C. Vaiana

, Carsten Kutzner, Lars V. Bock, Christian Blau,

Helmut Grubmüller

1596-P

os

B

oard

B547

education

travel awardee

MOLECULAR DYNAMICS STUDIO OF POLY(VINYL ALCOHOL)

MECHANICAL PROPERTIES FOR ITS INCORPORATION IN

BONES STRUCTURES AS A PVA-PLA SUBSTRATE FOR TISSUE

REGENERATION.

Ana C. Cadena

, Dennis Cazar, Samara M. Oña,

Miguel A. Mendez