183
Biophysical Society 58
th
Annual Meeting, San Francisco, California
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3496-P
os
B
oard
#B224
SINGLE-MOLECULE VISUALIZATION OF RUVB ORIGOMER
FOR CHARACTORIZING A AAA
+
CLASS HEXAMERIC ATPASE
WITH ZERO-MODE WAVEGUIDES.
Takuma Iwasa
,
Yong-Woon Han, Hiroaki Yokota, Ryuji Yokokawa, Teruo Ono,
Ryo Hiramatsu, Yoshie Harada
3497-P
os
B
oard
#B225
DYNAMICS OF DNA DAMAGE RECOGNITION BY NUCLEOTIDE
EXCISION REPAIR PROTEIN XPC.
Yogambigai Velmurugu
,
Xuejing Chen, Jung-Hyun Min, Anjum Ansari
3498-P
os
B
oard
#B226
ATOMISTIC STUDIES SUPPORT A DETAILED MODEL OF RECA
MEDIATED HOMOLOGY RECOGNITION AND STRAND
EXCHANGE.
Darren Yang
, Chantal Prevost, Mara Prentiss
3499-P
os
B
oard
#B227
INVESTIGATION OF THE DRUG LIKE MOLECULE BINDING
TO DNA SINGLE STRAND BREAKS USING IMPROVED
HYDROXYL RADICAL CLEAVAGE METHODOLOGY.
Shu Zhang
,
Philip H. Bolton
3500-P
os
B
oard
#B228
GLOBAL AND LOCAL CONFORMATION OF MISMATCHED
DUPLEX DNA UPON MSH2-MSH6 BINDING STUDIED BY
STEADY-STATE AND TIME-RESOLVED FLUORESCENCE.
Yan Li
, Manju Hingorani, Ishita Mukerji
3501-P
os
B
oard
#B229
STRUCTURALLY DISTINCT COMPLEXES OF UBIQUITIN AND
SUMO-MODIFIED PCNA LEAD TO DISTINCT DNA DAMAGE
RESPONSE PATHWAYS. Susan Tsutakawa, Chunli Yan, Xiaojun Xu,
Bret Freudenthal, Christopher Weinacht, Zhihao Zhuang,
Todd Washington,
Ivaylo Ivanov
3502-P
os
B
oard
#B230
INVESTIGATING CRE-RECOMBINASE-MEDIATED DNA
LOOPING USING FRET.
Massa J. Shoura
, Stephen D. Levene
3503-P
os
B
oard
#B231
DNA BENDING AND DISCRIMINATION OF MISMATCHES BY
MUTS AND HUMAN HOMOLOGS.
Michael Feig
, Monika Sharma,
Alexander Predeus, Shayantani Mukherjee, Nicholas Kovacs
3504-P
os
B
oard
#B232
SINGLE MOLECULE DYNAMICS GOVERNING THE
INITIATION OF V(D)J RECOMBINATION.
Geoffrey Lovely
,
Martin Linden, Pradeep Ramesh, David Schatz, David Baltimore,
Rob Phillips
3505-P
os
B
oard
#B233
SUBSTRATE INTERACTIONS OF A HUMAN DNA
ALKYLTRANSFERASE.
Michael G. Fried
, Manana Melikishvili,
Lance M. Hellman
3506-P
os
B
oard
#B234
WATCHING AID SCANNING SINGLE STRANDED AND
TRANSCRIBED DNAWITH SINGLE MOLECULE RESOLUTION.
Gayan Senavirathne, Jeff Bertram, Malgorzata Jaszczur, Phuong Pham,
Chi Mak, Myron F. Goodman,
David Rueda
3507-P
os
B
oard
#B235
NICKING SINGLE DNA MOLECULES TO STUDY INITIATION
OF MISMATCH REPAIR.
Jordan Monnet
, Audrey Quessada-Vial,
Nicolaas Hermans, Evan Graves, Herrie H.K. Winterwerp,
Peter Friedhoff, Titia K. Sixma, Joyce H.G. Lebbink, Terence R. Strick
3508-P
os
B
oard
#B236
USING NANOFLUIDIC CHANNELS TO PROBE THE DYNAMICS
OF RAD51-DNA FILAMENTS.
Louise Helena Fornander
,
Fredrik Persson, Joachim Fritzsche, Joshua Araya, Philip Nevin,
Penny Beuning, Mauro Modesti, Karolin Frykholm, Fredrik Westerlund
3509-P
os
B
oard
#B237
A SINGLE-STRAND ANNEALING PROTEIN CLAMPS DNA TO
DETECT HOMOLOGY. Marcel Ander, Sivaraman Subramaniam,
Karim Fahmy, A. Francis Stewart,
Erik Schäffer
3510-P
os
B
oard
#B238
KINETIC ANALYSIS OF INTERACTIONS BETWEEN MUTS,
MUTL AND DNA DURING INITIATION OF DNA MISMATCH
REPAIR.
Anushi Sharma
, Manju Hingorani
3511-P
os
B
oard
#B239
BUILDING A BETTER ENGINE: STIMULATION OF SINGLE
MOLECULES OF SGS1 BY RPA AND TOP3-RMI1.
Jason C. Bell
,
Cejka Petr, Kowalczykowski C. Stephen
DNA Structure and Dynamics III
(Boards #B240–#B250)
3512-P
os
B
oard
#B240
CONSTRUCTION AND CHARACTERIZATION OF CY3- OR
CY5-CONJUGATED HAIRPIN PYRROLE/IMIDAZOLE
POLYAMIDES BINDING TO DNA IN THE NUCLEOSOME.
Yong-Woon Han
, Tomoko Matsumoto, Hiroaki Yokota, Yasuo Tsunaka,
Gengo Kashiwazaki, Hironobu Morinaga, Kaori Hashiya,
Toshikazu Bando, Hiroshi Sugiyama, Yoshie Harada
3513-P
os
B
oard
#B241
EXTRACTION OF CONVENTIONAL TWO-STATE MELTING
TEMPERATURE FROM DNA OLIGOMERS WITH SIGNIFICANT
PREMELTING BEHAVIOR.
Eric W. Hall
, Gregory W. Faris
3514-P
os
B
oard
#B242
TARGETING OF A DNA PSEUDOKNOT IS HINDERED DUE
TO FORMATION OF BASE-TRIPLET STACKS.
Calliste Reiling
,
Luis A. Marky
3515-P
os
B
oard
#B243
SINGLE-MOLECULE FRET DETECTS INTERMEDIATES
AND FAST DYNAMICS OF DNA HOLLIDAY JUNCTIONS.
Alessandro Valeri, Suren Felekyan, Stanislav Kalinin, Markus Richert,
Stefan Marawske, Enno Schweinberger,
Ralf Kuehnemuth
,
Claus A. M. Seidel
3516-P
os
B
oard
#B244
FLUORESCENCE APPROACH TO STUDY BASE FLIPPING IN
THE DNA REPAIR MECHANISM OF T4 ENDONUCLEASE
V. Matthew R. Vander-Schuur, Ricardo Martin,
Elvin A. Aleman
3517-P
os
B
oard
#B245
‘AT’ CONTENT AS A DETERMINANT OF THE CHROMOSOME
STRUCTURE.
Hajin Kim
, Jejoong Yoo, Aleksei Aksimentiev, Taekjip Ha
3518-P
os
B
oard
#B246
CONFORMATIONS OF P53 RESPONSE ELEMENTS IN
SOLUTION DEDUCED USING SITE-DIRECTED SPIN
LABELING AND MONTE CARLO SAMPLING. Xiaojun Zhang,
Ana Carolina Dantas Machado, Remo Rohs,
Peter Qin
3519-P
os
B
oard
#B247
UNIVERSAL BEHAVIOR OF DNA ESCAPE, DRIFT, AND
DIFFUSION IN NANOPORES.
David P. Hoogerheide
,
Jene A. Golovchenko
