174
Biophysical Society 58
th
Annual Meeting, San Francisco, California
Correlated Motions in Proteins
(Boards #B1–#B30)
3273-P
os
B
oard
#B1
DISTINCT DYNAMIC SIGNATURES OF AMYLOIDOGENIC
INSULIN REVEALED BY NEUTRON SPIN ECHO SPECTROSCOPY.
Claus Czeslik
, Mirko Erlkamp, Roland Winter
3274-P
os
B
oard
#B2
GSATOOLS: ANALYSIS OF ALLOSTERIC COMMUNICATION
AND FUNCTIONAL LOCAL MOTIONS USING A STRUCTURAL
ALPHABET.
Alessandro Pandini
, Arianna Fornili, Franca Fraternali,
Jens Kleinjung
3275-P
os
B
oard
#B3
RECAPTURING THE CORRELATED MOTIONS OF PROTEIN BY
USING COARSE GRAINED MODELS.
Yan Lu
, Freddie R. Salsbury, Jr
3276-P
os
B
oard
#B4
MODULATION OF ACTIVE SITE PICOSECOND DYNAMICS
IN MUTANT FORMS OF A THERMOPHILIC ALCOHOL
DEHYDROGENASE (HT-ADH).
Corey W. Meadows
, Judith P. Klinman
3277-P
os
B
oard
#B5
ATP BINDING INDUCED CONFORMATIONAL CHANGE IN
RECQ HELICASE.
Maria Mills
, Keir Neuman
3278-P
os
B
oard
#B6
THERMODYNAMIC BASIS OF THE ALLOSTERIC ACTIVATION
OF PROTEIN KINASE A.
Jonggul Kim
, Frank Chao, Gianluigi Veglia
3279-P
os
B
oard
#B7
PROBING ALLOSTERIC MECHANISMS OF UTROPHIN AND
DYSTROPHIN ACTIN-BINDING DOMAINS, USING THERMAL
DENATURATION.
Michael E. Fealey
, Jonathan Crain, Anne Hinderliter,
David D. Thomas
3280-P
os
B
oard
#B8
TEMPERATURE DEPENDENCE OF THE PROTEIN-
CHROMOPHORE HYDROGEN BOND DYNAMICS IN THE
FAR-RED FLUORESCENT PROTEIN MPLUM.
Chola K. Regmi
,
Prem P. Chapagain, Bernard S. Gerstman
3281-P
os
B
oard
#B9
DYNAMICS OF NEUROTOXIN II PROVIDES ADAPTIVITY OF
ITS FUNCTIONAL SITES.
Dmitry M. Lesovoy
, Svetlana B. Nolde,
Eduard V. Bocharov, Ekaterina N. Lyukmanova, Dmitry A. Dolgikh,
Mikhail P. Kirpichnikov, Alexander S. Arseniev
3282-P
os
B
oard
#B10
education
travel
awardee
THE DYNAMIC FUNCTIONAL CONSEQUENCES OF THE
THROMBIN-THROMBOMODULIN INTERACTION.
Lindsey D. Handley
, Kyle N. Stearns, Elizabeth A. Komives
3283-P
os
B
oard
#B11
COMPUTATIONAL SIMULATIONS REVEAL HOW CALMODULIN
METHIONINE OXIDATION TRIGGERS LARGE-SCALE
CHANGES IN STRUCTURAL DYNAMICS.
Michael Olenek
,
David D. Thomas, Jennifer C. Klein
3284-P
os
B
oard
#B12
ALLOSTERIC EFFECTORS HAVE AN ASYMMETRIC EFFECT
ON THE COMPRESSIBILITY OF HEMOGLOBIN SUBUNITS.
Gusztav Schay
, Andras Kaposi, Miklos Kellermayer, Laszlo Smeller,
Levente Herenyi, Krisztian Szigeti, Judit Fidy
3285-P
os
B
oard
#B13
SUPERVISED LEARNING ON MARKOV STATES AS A METHOD
FOR GAINING INSIGHT INTO PROTEIN ALLOSTERY.
Mohammad M. Sultan
3286-P
os
B
oard
#B14
ALLOSTERIC MODULATION OF CADHERIN AFFINITY.
Nitesh Shashikanth
, Jillian Newhall, Yuliya Petrova, Barry M. Gumbiner,
Deborah Leckband
3287-P
os
B
oard
#B15
SECTOR ANALYSIS OF PROTEIN BASED ON MOLECULAR
DYNAMICS SIMULATIONS: ROLE OF ATOMIC FLUCTUATIONS
IN SINGLE DOMAIN ALLOSTERISM.
Lakhani Bharat
,
Beveridge L. David
3288-P
os
B
oard
#B16
education
travel
awardee
DYNAMIC BEHAVIOR OF OLIGOMERIC INORGANIC
PYROPHOSPHATASE (IPPASE) STUDIED BY QUASIELASTIC
NEUTRON SCATTERING.
Utsab R. Shrestha
, Kurt VanDelinder,
Manavalan Gajapathy, John Copley, Juscelino Leao, Joseph D. Ng,
Xiang-Qiang Chu
3289-P
os
B
oard
#B17
ALLOSTERIC REGULATION OF PROTEIN KINASE ENZYMES
VIA AN ELECTROSTATIC SWITCH THAT MODULATES ACTIVE
SITE DYNAMICS.
Matthew A. Young
, Douglas M. Jacobsen,
Zhao-Qin Bao
3290-P
os
B
oard
#B18
A NETWORK OF “MOLECULAR-SWITCHES” CONTROL THE
ACTIVATION OF KEY BACTERIAL SIGNALING PROTEIN.
Dan Vanatta
3291-P
os
B
oard
#B19
COARSE-GRAINED MODELING OF THE DYNAMICS AND
ALLOSTERIC MODULATION OF HRAS PROTEIN.
Abhijeet Kapoor
, Alex Travesset
3292-P
os
B
oard
#B20
REDISTRIBUTION OF FLEXIBILITY IN STABILIZING
ANTIBODY FRAGMENT MUTANTS FOLLOWS LE CHATELIER’S
PRINCIPLE. Tong Li, Malgorzata B. Tracka, Shahid Uddin,
Jose Casas-Finet,
Donald J. Jacobs
, Dennis R. Livesay
3293-P
os
B
oard
#B21
education
travel
awardee
GENERALIZED MODEL-FREE SPECTRAL DENSITY ANALYSIS
APPLIED TO RHODOPSIN ACTIVATION IN MEMBRANES.
Xiaolin Xu
, Andrey V. Struts, K. J. Mallikarjunaiah, Michael F. Brown
3294-P
os
B
oard
#B22
CONFORMATIONAL MOTION IN GENE REGULATORY
PROTEINS.
David V. Svintradze
3295-P
os
B
oard
#B23
DIFFERENCES IN TROPONIN C DYNAMICS BETWEEN
CARDIAC AND SKELETAL MUSCLE - A MOLECULAR DYNAMICS
PERSPECTIVE.
Steffen Lindert
, Andy McCammon
3296-P
os
B
oard
#B24
THE ROLE OF CONFORMATIONAL FLEXIBILITY IN INHIBITOR
BINDING AND SUBSTRATE RECOGNITION FOR CYP119.
Xiaoxiao Shi
, Shu-Hao Liou, R.David Britt, David B. Goodin
3297-P
os
B
oard
#B25
CONFORMATIONAL CHANGES IN PROTEIN BINDING
PROCESSES.
Béla Voß
, Helmut Grubmüller
