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Diagnostics: Nucleic acid testing
Real time PCR Assays
•
Platform supported at Laboratory Response
Network (LRN)
•
High throughput
•
Sensitive/specific
–
Sensitive to 1-50 genome copies
–
Historically lesion samples contained 10
4
-10
7
infectious virions
–
Assays validated against authentic
Variola virus
genomic material
•
Limitations:
–
time to get samples to reference labs
Diagnostics developed
•
CDC developed/evaluated (real time) PCR assays targeting
Orthopoxvirus
genus and various species (
Variola, Monkeypox, Vaccinia
, etc. )
–
Provide reagents/facilities for others to evaluate assays
•
~Thirteen peer-reviewed publications evaluate PCR assays against authentic
Variola virus
genomic material
•
Subset used in LRN (
Variola, Monkeypox, Cowpox
and
Vaccinia virus
detection)
–
2002 onward: vaccine AE identification
–
2003: response to monkeypox outbreak
•
Regulatory agency approval
–
De novo 510K submitted on
Orthopoxvirus
non-variola assay
•
Approved September 2012
–
Discussion initiated with FDA (2002) on
Variola virus
assay
•
Submission on newly validated assays to occur in 2016
•
Initiating, technology transfer to other countries
–
Monkeypox
–
Smallpox laboratory diagnostics network (WHO sponsored)