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the SMPR Method

Performance

REquirements table

specifications for all

analytes in the SMPR

applicability statement? If

not, please specify what is

missing and whether or

not the method's

applicability should be

modified.

unclear from the submission which data were used

to generate these values. As noted in previous

questions regarding definitions, the use of whole

milk powder instead of whole liquid milk and spray

dried whole egg instead of liquid whole egg affects

the MQL, MDL, and quantitative range values for

method performance in some cases. Also, as

discussed in the summary and in later questions,

there are issues around the clarity of the

quantification strategy, which also impacts the

method the authors used to determine Recovery

performance.

1. Based on the

supporting information,

were there any additional

steps in the evaluation of

the method that indicated

the need for any

additional precautionary

statements in the

method?

No.

2. Is there information

demonstrating that the

method system suitability

tests and controls as

specified in the SMPR

worked appropriately and

as expected? If no, please

specify.

The choice of materials for the system suitability

test (fractionated or partially purified versions of

proteins from two foods) seems a bit unusual and

requires more justification. Also, the levels at which

these suitability samples were run does not

correspond to the SMPR, which requires blank

check samples and check standards at the lowest

point and midrange point of the analytical range.

Also, it’s unclear even how the given peptide peak

areas would be obtained for

Milk.Protein_2.Peptide_B, as this peptide is from

beta-casein (see description in general comments),

which is not specifically included in the system

suitability test sample.

3. Based on the

supporting information, is

the method written clearly

No. One of the primary issues is with the

quantification strategy. It is unclear from the

submission how quantification would be conducted